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Softwares Developed at MetaBioSys Laboratory

BIOFIN

BIOFIN is a machine learning based tool for the identification of novel and effective biofilm inhibitory peptides (BIPs). Tools like Peptide prediction, Protein scan, Epitope Mapping, Similarity search are included to assist user.

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ProInflam

ProInflam is a comprehensive web server for analysis and prediction of proinflamatory response of any peptide/protein antigen. Tools like Peptide prediction, Protein scan, Epitope Mapping, Similarity search are included to assist user.

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Hype

'Hype' tool helps in the identification and classification of novel peptidoglycan hydrolases from complete genomic or metagenomic ORFs. HyPe is also available as stand-alone tool.

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microTaxi

Microtaxi uses an taxon-specific gene based approach and provides an alternate valuable methodology to carry out the taxonomic classification of newly sequenced or existing bacterial genomes.

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Woods

Woods tool using an integrated approach for fast and accurate functional annotation of proteins in both genomic and metagenomic datasets. It is available as stand-alone tool as well as a publicly available web-server.

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16S Classifier

'16S Classifier' is a Random Forest based tool which is developed to carry out fast, efficient and accurate taxonomic classification of 16S rRNA sequences. It has the unique ability to classify small Hypervariable Regions of 16S rRNA.

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MP3

MP3 software is developed using an integrated SVM-HMM approach to provide improved efficiency and accuracy to predict pathogenic proteins in both genomic and metagenomic datasets.

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Antiinflam

A Machine learning based tool for predicting antiinflammatory response of any peptide/protein antigen

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BiofuelDB

BioFuelDB is a database of enzymes which have application in biofuel production

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IL17

Antigen-specific induction of IL-17 cytokines leads to proinflammatory responses in various autoimmune diseases. Here, we have provided a machine learning based tool for predicting IL-17 inducing response of any peptide/protein antigen.

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